Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
ATAC-seq
8
WGBS
Assay category
23
DNA methylation
12
DNA accessibility
Date released
23
July, 2019
10
February, 2023
2
February, 2021
Available data
3392
bam
3129
bigWig
1777
bed narrowPeak
1600
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
19
tissue
10
primary cell
5
in vitro differentiated cells
1
cell line
Organ
8
heart
7
connective tissue
6
epithelium
4
bone element
4
kidney
4
skeleton
3
brain
2
liver
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
27
hg19
10
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
files.file_type!
fastq
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
RRBS
ATAC-seq
WGBS
tissue
heart left ventricle
1
2
brain
1
1
heart right ventricle
2
acetabular part of hip bone
1
aorta
1
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
See all biosamples
Download