Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
15
RRBS
15
WGBS
2
ATAC-seq
Assay category
206
DNA accessibility
DNA binding
30
DNA methylation
Date released
187
June, 2019
23
July, 2019
16
November, 2018
August, 2017
7
October, 2019
1
March, 2019
1
November, 2020
1
October, 2017
Available data
1713
bam
1678
bigWig
1511
tsv
482
bed narrowPeak
395
fastq
231
bigBed narrowPeak
220
bed bed3+
206
bed broadPeak
204
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
236
Homo sapiens
Biosample type
198
tissue
36
primary cell
2
cell line
Organ
82
kidney
38
heart
37
limb
35
musculature of body
34
brain
22
epithelium
18
ureter
15
pancreas
13
vasculature
10
blood vessel
9
connective tissue
7
liver
5
eye
4
artery
3
spleen
2
adipose tissue
2
nerve
2
vein
1
pericardium
Project
236
AMP
Genome assembly (visualization)
220
GRCh38
197
hg19
Lab
234
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
month_released!
August, 2017
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
236 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
RRBS
WGBS
ATAC-seq
tissue
heart
18
1
muscle of arm
17
brain
14
1
kidney
13
1
muscle of leg
13
1
+ See 43 more…
primary cell
cardiac fibroblast
3
1
cardiac muscle cell
1
1
choroid plexus epithelial cell
1
1
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
1
1
+ See 17 more…
cell line
HepG2
1
Panc1
1
See all biosamples
Download