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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
381
ChIP-seq
Assay category
381
DNA binding
Target of assay
244
transcription factor
75
histone
75
histone modification
66
recombinant protein
59
control
45
broad histone mark
37
RNA binding protein
30
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
596
February, 2021
381
November, 2017
308
August, 2017
303
May, 2021
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
100
July, 2019
97
May, 2019
94
December, 2017
88
November, 2018
79
February, 2023
74
October, 2018
73
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
44
May, 2022
41
September, 2020
40
May, 2024
39
February, 2018
35
December, 2018
31
November, 2019
30
January, 2019
20
March, 2020
17
October, 2017
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
4
August, 2018
3
June, 2018
1
March, 2019
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
0
bigBed bedMethyl
Organism
381
Homo sapiens
Biosample type
315
cell line
57
tissue
9
primary cell
Organ
315
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
381
AMP
Genome assembly (visualization)
281
hg19
279
GRCh38
Lab
381
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
381 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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