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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
15
RRBS
5
Hi-C
Assay category
32
DNA methylation
5
3D chromatin structure
Date released
23
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3248
bam
2998
bigWig
1594
bed narrowPeak
1576
tsv
1358
fastq
938
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
195
bed bed3+
153
zippedFastqFolder
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
37
Homo sapiens
Biosample type
24
tissue
11
primary cell
2
cell line
Organ
8
epithelium
8
heart
7
pancreas
5
brain
4
connective tissue
kidney
4
liver
4
musculature of body
4
vasculature
3
blood vessel
2
adipose tissue
2
spleen
1
eye
1
limb
1
pericardium
Project
37
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
kidney
BIOSAMPLE
ASSAY
37 results
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Clear Filters
WGBS
RRBS
Hi-C
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 6 more…
cell line
HepG2
1
Panc1
1
See all biosamples
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