Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
19
RRBS
10
WGBS
Assay category
64
DNA accessibility
29
DNA methylation
Date released
64
August, 2021
23
July, 2019
November, 2018
6
August, 2017
Available data
3305
bam
3049
bigWig
1704
bed narrowPeak
1600
tsv
1270
fastq
969
bigBed narrowPeak
398
tagAlign
313
bed broadPeak
276
bigBed broadPeak
264
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
93
Homo sapiens
Biosample type
83
tissue
10
primary cell
Organ
68
kidney
8
heart
6
epithelium
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
93
AMP
Genome assembly (visualization)
74
GRCh38
19
hg19
Lab
64
Katalin Susztak, Upenn
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
November, 2018
BIOSAMPLE
ASSAY
93 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
RRBS
WGBS
tissue
kidney
64
1
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
See all biosamples
Download