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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
14
WGBS
Assay category
33
DNA methylation
Date released
22
July, 2019
7
November, 2018
4
August, 2017
Available data
2770
bam
2594
bigWig
bed narrowPeak
1311
fastq
1131
tsv
953
bigBed narrowPeak
384
tagAlign
306
bed broadPeak
270
bigBed broadPeak
256
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
22
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
19
hg19
14
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
blood vessel
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
33 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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