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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
16
RRBS
Assay category
33
DNA methylation
Date released
20
July, 2019
7
November, 2018
6
August, 2017
Available data
3173
bam
2971
bigWig
1721
bed narrowPeak
1445
tsv
1347
fastq
1012
bigBed narrowPeak
395
tagAlign
314
bed broadPeak
277
bigBed broadPeak
263
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
18
hic
16
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
25
tissue
7
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
33
AMP-T2D consortium
Audit category:
inconsistent ontology term
organ_slims!
eye
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
33 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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