Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
17
WGBS
3
ChIP-seq
1
FAIRE-seq
Assay category
35
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
22
July, 2019
7
November, 2018
6
August, 2017
3
November, 2017
1
October, 2019
Available data
3385
bam
3123
bigWig
1744
bed narrowPeak
1595
tsv
1358
fastq
1036
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
39
Homo sapiens
Biosample type
25
tissue
10
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
eye
1
limb
1
pericardium
1
vein
Project
39
AMP
Genome assembly (visualization)
22
hg19
17
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
eye
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
+ See 5 more…
cell line
HepG2
1
3
See all biosamples
Download