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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
14
RRBS
3
ChIP-seq
1
FAIRE-seq
Assay category
31
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
18
July, 2019
7
November, 2018
6
August, 2017
3
November, 2017
1
October, 2019
Available data
3241
bam
3032
bigWig
1601
bed narrowPeak
1571
tsv
1358
fastq
932
bigBed narrowPeak
398
tagAlign
240
bed broadPeak
203
bigBed broadPeak
191
bed bed3+
153
zippedFastqFolder
99
txt
31
bed bedMethyl
31
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
24
tissue
7
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
eye
1
limb
1
pericardium
1
vein
Project
35
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
eye
kidney
BIOSAMPLE
ASSAY
35 results
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Clear Filters
WGBS
RRBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
hepatocyte
1
+ See 2 more…
cell line
HepG2
1
3
See all biosamples
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