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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RRBS
16
WGBS
5
Hi-C
Assay category
16
DNA methylation
5
3D chromatin structure
Date released
11
July, 2019
7
November, 2018
2
August, 2017
1
October, 2019
Available data
3278
bam
3078
bigWig
1725
bed narrowPeak
1593
tsv
1354
fastq
958
bigBed narrowPeak
398
tagAlign
286
bed broadPeak
249
bigBed broadPeak
237
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
16
bed bedMethyl
16
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
21
Homo sapiens
Biosample type
15
tissue
4
primary cell
2
cell line
Organ
6
heart
5
pancreas
3
blood vessel
3
brain
3
connective tissue
3
vasculature
2
adipose tissue
2
epithelium
2
liver
2
spleen
limb
1
musculature of body
Project
21
AMP
Genome assembly (visualization)
17
GRCh38
5
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
limb
assay_title!
RRBS
BIOSAMPLE
ASSAY
21 results
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WGBS
Hi-C
tissue
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
pancreas
2
+ See 4 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
HepG2
1
Panc1
1
See all biosamples
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