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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
11
WGBS
Assay category
28
DNA methylation
Date released
21
July, 2019
4
August, 2017
3
November, 2018
Available data
2261
bam
2081
bigWig
1550
bed narrowPeak
941
bigBed narrowPeak
843
fastq
782
tsv
371
tagAlign
298
bed broadPeak
276
bigBed broadPeak
238
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
16
hic
15
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
17
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pancreas
adipose tissue
BIOSAMPLE
ASSAY
28 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
aorta
1
+ See 7 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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