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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
11
WGBS
Assay category
27
DNA methylation
Date released
20
July, 2019
4
August, 2017
3
November, 2018
Available data
2114
bam
1940
bigWig
1488
bed narrowPeak
923
bigBed narrowPeak
789
fastq
709
tsv
357
tagAlign
291
bed broadPeak
269
bigBed broadPeak
217
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
16
hic
15
bedpe bed3+
8
csv
6
bed bed3
4
tar
3
bed bedgraph
3
hdf5
2
ibed
1
tagAlign bed3+
1
vcf
Organism
27
Homo sapiens
Biosample type
17
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
27
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
pancreas
connective tissue
BIOSAMPLE
ASSAY
27 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
aorta
1
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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