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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
12
ATAC-seq
11
WGBS
Assay category
28
DNA methylation
12
DNA accessibility
Date released
21
July, 2019
10
February, 2023
4
August, 2017
3
November, 2018
2
February, 2021
Available data
2261
bam
2121
bigWig
1590
bed narrowPeak
941
bigBed narrowPeak
843
fastq
782
tsv
371
tagAlign
298
bed broadPeak
276
bigBed broadPeak
238
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
16
hic
15
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
40
Homo sapiens
Biosample type
22
tissue
11
primary cell
5
in vitro differentiated cells
2
cell line
Organ
9
connective tissue
8
heart
6
epithelium
pancreas
4
bone element
4
kidney
4
liver
4
musculature of body
4
skeleton
3
brain
adipose tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
29
hg19
13
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
organ_slims!
pancreas
adipose tissue
BIOSAMPLE
ASSAY
40 results
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Clear Filters
RRBS
ATAC-seq
WGBS
tissue
heart left ventricle
1
2
brain
1
1
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 6 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
1
See all biosamples
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