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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
DNA accessibility
58
DNA binding
Target of assay
44
transcription factor
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
Available data
2508
bam
2274
bigWig
1328
tsv
1059
bed narrowPeak
907
fastq
744
bigBed narrowPeak
298
tagAlign
157
txt
93
bed broadPeak
58
bigBed broadPeak
54
bed bed3+
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
58
Homo sapiens
Biosample type
58
cell line
primary cell
Organ
58
liver
Project
58
AMP
Genome assembly (visualization)
58
hg19
44
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
13
inconsistent control read length
assay_slims!
DNA accessibility
biosample_type!
primary cell
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
cell line
HepG2
58
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