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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
DNase-seq
ChIP-seq
Assay category
199
DNA accessibility
Date released
187
June, 2019
9
November, 2018
October, 2019
2
August, 2017
1
November, 2020
Available data
1783
bam
1748
bigWig
1584
tsv
501
fastq
477
bed narrowPeak
229
bigBed narrowPeak
212
bed bed3+
201
bed broadPeak
199
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
vcf
Organism
199
Homo sapiens
Biosample type
172
tissue
26
primary cell
1
in vitro differentiated cells
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
9
connective tissue
7
vasculature
6
pancreas
5
blood vessel
5
liver
4
eye
2
adipose tissue
2
artery
1
spleen
Project
199
AMP
Genome assembly (visualization)
198
GRCh38
176
hg19
Lab
199
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
October, 2019
BIOSAMPLE
ASSAY
199 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 17 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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