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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
47
transcription factor
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
45
November, 2017
2
August, 2017
Available data
471
bigWig
460
bam
444
bed narrowPeak
429
fastq
390
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
bed bed3+
9
tagAlign
3
tar
Organism
47
Homo sapiens
Biosample type
42
cell line
5
primary cell
Organ
42
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
47
AMP
Genome assembly (visualization)
47
hg19
34
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
inconsistent control read length
files.file_type!
bed bed3+
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
cell line
HepG2
42
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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