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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
191
DNase-seq
2
ChIP-seq
Assay category
191
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
183
June, 2019
9
October, 2019
1
November, 2020
Available data
3180
bam
2937
bigWig
1714
bed narrowPeak
1450
tsv
fastq
1018
bigBed narrowPeak
395
tagAlign
318
bed broadPeak
281
bigBed broadPeak
267
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
18
hic
16
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
193
Homo sapiens
Biosample type
166
tissue
26
primary cell
1
cell line
Organ
77
kidney
35
limb
32
musculature of body
30
brain
29
heart
18
ureter
17
epithelium
12
vasculature
11
blood vessel
6
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
193
AMP
Genome assembly (visualization)
191
GRCh38
170
hg19
Lab
193
AMP-T2D consortium
Audit category:
inconsistent ontology term
files.file_type!
fastq
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
193 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
brain
12
muscle of leg
12
+ See 36 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 15 more…
cell line
Panc1
1
See all biosamples
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