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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
6
ChIP-seq
3
Hi-C
Assay category
32
DNA accessibility
6
DNA binding
3
3D chromatin structure
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
30
June, 2019
6
November, 2017
3
July, 2019
2
November, 2018
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
41
Homo sapiens
Biosample type
27
tissue
14
primary cell
Organ
78
kidney
71
liver
41
brain
36
limb
34
musculature of body
30
heart
29
pancreas
28
connective tissue
27
epithelium
19
vasculature
18
ureter
15
blood vessel
6
adipose tissue
4
artery
4
eye
4
vein
3
embryo
2
nerve
1
spleen
Project
41
AMP
Genome assembly (visualization)
38
GRCh38
31
hg19
Lab
41
AMP-T2D consortium
BIOSAMPLE
ASSAY
41 results
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DNase-seq
ChIP-seq
Hi-C
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
2
1
brain microvascular endothelial cell
1
2
1
choroid plexus epithelial cell
1
2
brain pericyte
1
1
astrocyte of the hippocampus
1
See all biosamples
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