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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
DNase-seq
132
ChIP-seq
16
ATAC-seq
5
Hi-C
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
16
DNA accessibility
Date released
14
February, 2023
2
February, 2021
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
0
bigBed broadPeak
Organism
16
Homo sapiens
Biosample type
9
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
10
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
16
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
adipocyte
1
preadipocyte
1
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
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