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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
318
ChIP-seq
Assay category
318
DNA binding
Target of assay
240
transcription factor
75
histone
75
histone modification
66
recombinant protein
46
broad histone mark
35
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
318
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
72
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
10
February, 2023
6
October, 2017
5
September, 2017
2
February, 2021
2
July, 2019
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
0
bed bed3
Organism
318
Homo sapiens
Biosample type
255
cell line
57
tissue
6
primary cell
Organ
255
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
318
AMP
Genome assembly (visualization)
280
GRCh38
264
hg19
Lab
318
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
318 results
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ChIP-seq
cell line
HepG2
255
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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