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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
23
DNA accessibility
1
3D chromatin structure
Date released
23
June, 2019
1
August, 2018
1
August, 2021
Available data
394
bam
350
fastq
198
tsv
179
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
113
bigWig
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
25
Homo sapiens
Biosample type
17
tissue
7
primary cell
1
in vitro differentiated cells
Organ
10
brain
7
kidney
6
epithelium
3
heart
3
pancreas
2
connective tissue
1
adipose tissue
1
blood vessel
1
vasculature
Project
25
AMP
Genome assembly (visualization)
hg19
267
GRCh38
Lab
24
AMP-T2D consortium
1
Bing Ren, UCSD
assembly!
hg19
BIOSAMPLE
ASSAY
25 results
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DNase-seq
Hi-C
pCHi-C
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 10 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
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