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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
6
ChIP-seq
Assay category
11
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
control
2
narrow histone mark
2
transcription factor
Date released
7
June, 2019
6
October, 2019
4
November, 2017
Available data
163
bam
153
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
4
fastq
4
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
12
primary cell
5
tissue
Organ
446
pancreas
390
liver
258
epithelium
83
connective tissue
78
kidney
54
blood
54
bodily fluid
46
brain
36
limb
35
musculature of body
30
heart
26
adipose tissue
20
embryo
18
ureter
17
vasculature
16
spleen
13
blood vessel
4
artery
4
eye
4
vein
2
nerve
Project
17
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
17 results
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Clear Filters
DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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