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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
47
transcription factor
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
60
November, 2017
13
August, 2017
Available data
1476
bam
1271
bigWig
1210
bed narrowPeak
851
fastq
730
bigBed narrowPeak
392
tagAlign
108
bed broadPeak
73
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
Organism
73
Homo sapiens
Biosample type
58
cell line
15
primary cell
Organ
58
liver
6
brain
6
epithelium
vasculature
4
blood vessel
2
vein
Project
73
AMP
Genome assembly (visualization)
73
hg19
58
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
organ_slims!
vasculature
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
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