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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ChIP-seq
Assay category
9
DNA accessibility
4
DNA binding
Target of assay
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
7
June, 2019
4
November, 2017
2
October, 2019
Available data
165
bam
140
bigWig
120
bed narrowPeak
70
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
hdf5
1
bedpe bed3+
1
hic
Organism
13
Homo sapiens
Biosample type
8
primary cell
5
tissue
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
vein
2
adipose tissue
2
nerve
1
spleen
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
13 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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