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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
4
ChIP-seq
Assay category
16
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
9
June, 2019
7
October, 2019
2
November, 2017
2
November, 2018
Available data
869
bam
773
bigWig
485
tsv
474
fastq
343
bed narrowPeak
170
bigBed narrowPeak
80
zippedFastqFolder
40
bed bed3+
34
bed broadPeak
25
tagAlign
20
bigBed broadPeak
10
hic
9
bedpe bed3+
7
bed bedMethyl
7
bigBed bedMethyl
6
txt
3
cool
3
hdf5
1
bedpe
1
tar
Organism
20
Homo sapiens
Biosample type
11
tissue
8
primary cell
1
cell line
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
17
hg19
Lab
20
AMP-T2D consortium
BIOSAMPLE
ASSAY
20 results
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DNase-seq
ChIP-seq
tissue
body of pancreas
4
coronary artery
2
pancreas
2
tibial artery
2
ascending aorta
1
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
kidney capillary endothelial cell
1
cell line
Panc1
1
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