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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
6
ChIP-seq
2
RRBS
Assay category
32
DNA accessibility
6
DNA binding
2
DNA methylation
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
30
June, 2019
6
November, 2017
2
July, 2019
2
November, 2018
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
40
Homo sapiens
Biosample type
28
tissue
12
primary cell
Organ
82
kidney
66
liver
40
brain
38
heart
37
limb
37
musculature of body
28
epithelium
19
vasculature
18
ureter
14
blood vessel
13
pancreas
12
connective tissue
5
eye
4
adipose tissue
4
artery
4
vein
3
spleen
2
nerve
1
pericardium
Project
40
AMP
Genome assembly (visualization)
38
GRCh38
30
hg19
Lab
40
AMP-T2D consortium
BIOSAMPLE
ASSAY
40 results
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DNase-seq
ChIP-seq
RRBS
tissue
brain
14
1
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
choroid plexus epithelial cell
1
2
1
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
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