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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
4
ChIP-seq
Assay category
11
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
7
June, 2019
4
November, 2017
4
October, 2019
Available data
140
bam
112
bigWig
92
bed narrowPeak
68
tsv
42
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
15
Homo sapiens
Biosample type
10
primary cell
5
tissue
Organ
78
kidney
55
liver
38
brain
36
limb
33
musculature of body
30
heart
20
epithelium
18
ureter
15
vasculature
11
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
15
AMP
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
15 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
endothelial cell of umbilical vein
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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