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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
4
ChIP-seq
Assay category
10
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
6
June, 2019
4
November, 2017
4
October, 2019
Available data
139
bam
111
bigWig
91
bed narrowPeak
68
tsv
41
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
12
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
9
primary cell
5
tissue
Organ
kidney
55
liver
38
brain
36
limb
33
musculature of body
30
heart
20
epithelium
18
ureter
15
vasculature
11
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
broad histone mark
organ_slims!
kidney
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
endothelial cell of umbilical vein
2
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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