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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
47
transcription factor
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
7
RNA binding protein
chromatin remodeller
1
other context
1
other post-translational modification
Date released
17
November, 2017
August, 2017
2
October, 2019
Available data
746
bigWig
743
bed narrowPeak
682
bam
361
bigBed narrowPeak
247
tagAlign
127
fastq
28
bed broadPeak
19
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
19
Homo sapiens
Biosample type
14
cell line
5
primary cell
Organ
14
liver
4
epithelium
4
vasculature
3
blood vessel
3
brain
2
vein
Project
19
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
11
inconsistent control read length
target.investigated_as!
chromatin remodeller
month_released!
August, 2017
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
cell line
HepG2
14
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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