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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
DNase-seq
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
55
November, 2017
8
August, 2017
2
October, 2019
Available data
1173
bam
925
bigWig
871
bed narrowPeak
747
fastq
652
bigBed narrowPeak
224
tagAlign
85
bed broadPeak
65
bigBed broadPeak
40
bed bed3+
3
tar
Organism
65
Homo sapiens
Biosample type
52
cell line
13
primary cell
Organ
52
liver
4
epithelium
4
vasculature
3
blood vessel
3
brain
2
vein
Project
65
AMP
Genome assembly (visualization)
65
hg19
49
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
8
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
cell line
HepG2
52
primary cell
skeletal muscle myoblast
8
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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