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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
Assay category
31
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
18
November, 2017
11
August, 2017
2
October, 2019
Available data
839
bigWig
821
bed narrowPeak
790
bam
396
bigBed narrowPeak
321
tagAlign
235
fastq
66
bed broadPeak
31
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
31
Homo sapiens
Biosample type
16
primary cell
15
cell line
Organ
15
liver
4
epithelium
4
vasculature
3
blood vessel
3
brain
2
vein
Project
31
AMP
Genome assembly (visualization)
31
hg19
27
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
11
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
primary cell
skeletal muscle myoblast
11
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
15
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