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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
DNase-seq
27
ATAC-seq
4
FAIRE-seq
Assay category
732
DNA binding
231
DNA accessibility
Date released
182
June, 2019
14
September, 2018
10
August, 2017
10
November, 2018
7
October, 2019
5
September, 2017
2
July, 2019
1
November, 2020
Available data
436
bed narrowPeak
368
bam
337
bigWig
231
bigBed narrowPeak
200
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
Organism
231
Homo sapiens
Biosample type
179
tissue
47
primary cell
3
in vitro differentiated cells
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
231
AMP
Genome assembly (visualization)
222
GRCh38
209
hg19
Lab
231
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
231 results
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DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 39 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 19 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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