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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
DNase-seq
27
ATAC-seq
5
FAIRE-seq
Assay category
789
DNA binding
240
DNA accessibility
Date released
187
June, 2019
14
September, 2018
12
October, 2019
10
August, 2017
9
November, 2018
5
September, 2017
2
July, 2019
1
November, 2020
Available data
490
bed narrowPeak
387
bam
348
bigWig
240
bigBed narrowPeak
208
bed bed3+
207
bed broadPeak
205
bigBed broadPeak
100
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
240
Homo sapiens
Biosample type
183
tissue
52
primary cell
3
in vitro differentiated cells
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
spleen
Project
240
AMP
Genome assembly (visualization)
230
GRCh38
217
hg19
Lab
240
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
240 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 41 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 22 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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