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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
Assay category
57
DNA binding
52
DNA accessibility
Target of assay
47
histone
47
histone modification
26
narrow histone mark
21
broad histone mark
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
23
June, 2019
14
August, 2017
10
October, 2019
6
November, 2017
4
May, 2019
Available data
247
bigWig
242
bam
226
bed narrowPeak
100
tagAlign
94
fastq
57
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
3
bed bed3+
Organism
57
Homo sapiens
Biosample type
377
tissue
353
cell line
57
primary cell
14
in vitro differentiated cells
Organ
22
epithelium
14
vasculature
12
blood vessel
10
vein
9
connective tissue
8
musculature of body
6
brain
6
kidney
3
heart
2
eye
Project
57
AMP
Genome assembly (visualization)
57
hg19
56
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
Audit category:
2
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
primary cell
skeletal muscle myoblast
14
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
4
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