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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
801
ChIP-seq
209
DNase-seq
66
ATAC-seq
52
single cell RNA-seq
41
WGBS
21
snATAC-seq
5
FAIRE-seq
Assay category
66
DNA accessibility
Date released
39
May, 2022
14
September, 2018
5
August, 2017
5
September, 2017
3
October, 2019
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
66
Homo sapiens
Biosample type
61
primary cell
3
tissue
2
in vitro differentiated cells
Organ
61
epithelium
61
pancreas
4
connective tissue
2
adipose tissue
1
liver
Project
39
HPAP
27
AMP
Genome assembly (visualization)
27
hg19
24
GRCh38
Lab
39
Klaus Kaestner, Upenn
27
AMP-T2D consortium
BIOSAMPLE
ASSAY
66 results
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ATAC-seq
primary cell
pancreatic alpha cell
28
pancreatic beta cell
20
pancreatic acinar cell
9
pancreatic ductal cell
4
tissue
adipose tissue
1
right lobe of liver
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
2
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