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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
FAIRE-seq
3
ATAC-seq
2
DNase-seq
Assay category
10
DNA accessibility
Date released
4
October, 2019
3
August, 2017
2
July, 2019
1
November, 2018
Available data
202
fastq
200
tsv
161
txt
153
zippedFastqFolder
103
bigWig
79
bam
77
bed narrowPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
15
bed bed3+
10
bed bed3
10
bigBed narrowPeak
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
bed broadPeak
2
ibed
1
bedpe
1
bigBed broadPeak
1
tar
1
vcf
0
tagAlign
Organism
10
Homo sapiens
Biosample type
5
tissue
3
primary cell
2
in vitro differentiated cells
Organ
3
connective tissue
2
pancreas
1
adipose tissue
1
blood vessel
1
brain
1
epithelium
1
kidney
1
vasculature
1
vein
Project
10
AMP
Genome assembly (visualization)
GRCh38
218
hg19
Lab
10
AMP-T2D consortium
assembly!
GRCh38
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
10 results
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FAIRE-seq
ATAC-seq
DNase-seq
tissue
adipose tissue
1
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
primary cell
skeletal muscle myoblast
2
endothelial cell of umbilical vein
1
in vitro differentiated cells
adipocyte
2
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