Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
123
DNA binding
10
DNA accessibility
Target of assay
66
histone
66
histone modification
55
transcription factor
41
broad histone mark
25
narrow histone mark
14
RNA binding protein
10
chromatin remodeller
Date released
39
May, 2019
33
October, 2019
27
December, 2018
15
January, 2019
12
November, 2018
5
June, 2019
2
November, 2017
Available data
240
bam
205
bigWig
183
bed narrowPeak
133
bigBed narrowPeak
68
tsv
63
fastq
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
133
Homo sapiens
Biosample type
62
tissue
54
cell line
17
primary cell
Organ
344
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
62
epithelium
54
blood
54
bodily fluid
47
musculature of body
26
nerve
25
artery
25
connective tissue
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
133
AMP
Genome assembly (visualization)
132
GRCh38
132
hg19
Lab
133
AMP-T2D consortium
Audit category:
1
inconsistent control
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
133 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
cell line
GM12878
54
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
Download