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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
403
ChIP-seq
Assay category
403
DNA binding
Target of assay
403
transcription factor
379
histone
379
histone modification
235
broad histone mark
144
narrow histone mark
91
RNA binding protein
81
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
236
November, 2017
63
November, 2018
31
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
5
April, 2019
5
May, 2019
4
June, 2019
2
August, 2017
Available data
454
bigWig
448
bam
432
bed narrowPeak
421
fastq
403
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
13
bed bed3+
5
tagAlign
3
tar
Organism
403
Homo sapiens
Biosample type
328
cell line
65
tissue
10
primary cell
in vitro differentiated cells
Organ
312
liver
51
blood
51
bodily fluid
10
pancreas
8
heart
6
connective tissue
6
spleen
5
adipose tissue
5
epithelium
5
vasculature
4
blood vessel
3
brain
2
kidney
1
artery
1
eye
Project
403
AMP
Genome assembly (visualization)
399
hg19
370
GRCh38
Lab
403
AMP-T2D consortium
Audit category:
28
inconsistent control
3
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
403 results
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Clear Filters
ChIP-seq
cell line
HepG2
277
GM12878
51
tissue
liver
33
body of pancreas
9
spleen
6
heart left ventricle
5
omental fat pad
3
+ See 7 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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