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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
DNase-seq
Assay category
14
DNA binding
1
DNA accessibility
Target of assay
12
histone
12
histone modification
7
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
14
December, 2017
1
October, 2019
Available data
75
bam
70
bigWig
45
bed narrowPeak
40
tsv
19
fastq
15
bigBed narrowPeak
3
tagAlign
1
bedpe bed3+
1
hic
Organism
15
Homo sapiens
Biosample type
primary cell
14
in vitro differentiated cells
1
cell line
Organ
356
liver
116
brain
88
heart
88
kidney
84
limb
69
pancreas
62
blood vessel
62
vasculature
54
blood
54
bodily fluid
38
musculature of body
26
nerve
25
artery
18
ureter
15
epithelium
13
connective tissue
13
spleen
10
adipose tissue
3
eye
Project
15
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
15
AMP-T2D consortium
biosample_type!
primary cell
biosample_type!!
primary cell
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
in vitro differentiated cells
hepatocyte
14
cell line
glomerular visceral epithelial cell
1
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