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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
DNase-seq
2
FAIRE-seq
Assay category
59
DNA binding
10
DNA accessibility
Target of assay
49
histone
49
histone modification
30
broad histone mark
19
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
14
August, 2017
7
October, 2019
4
June, 2019
3
November, 2018
1
May, 2019
Available data
495
bam
431
bigWig
309
tsv
213
fastq
146
bed narrowPeak
69
bigBed narrowPeak
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
4
bedpe bed3+
4
hic
1
bedpe
1
hdf5
Organism
63
Homo sapiens
Biosample type
62
tissue
primary cell
7
cell line
Organ
356
liver
116
brain
88
heart
88
kidney
84
limb
69
pancreas
62
blood vessel
62
vasculature
54
blood
54
bodily fluid
38
musculature of body
26
nerve
25
artery
18
ureter
15
epithelium
13
connective tissue
13
spleen
10
adipose tissue
3
eye
Project
69
AMP
Genome assembly (visualization)
67
GRCh38
67
hg19
Lab
69
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
cell line
Panc1
6
1
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