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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
47
histone
47
histone modification
26
narrow histone mark
21
broad histone mark
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
11
June, 2019
6
August, 2017
5
October, 2019
3
November, 2017
1
May, 2019
Available data
112
bigWig
104
bed narrowPeak
103
bam
47
tagAlign
40
fastq
26
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
2
bed bed3+
Organism
26
Homo sapiens
Biosample type
108
tissue
26
primary cell
10
cell line
5
in vitro differentiated cells
Organ
10
epithelium
7
vasculature
6
blood vessel
5
vein
4
connective tissue
4
musculature of body
3
brain
2
heart
2
kidney
1
eye
Project
26
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
26
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
1
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
5
skeletal muscle satellite cell
3
cardiac fibroblast
2
mesenchymal stem cell
2
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