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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
DNase-seq
1
ChIP-seq
1
FAIRE-seq
Assay category
3
DNA accessibility
1
DNA binding
Target of assay
1
RNA binding protein
1
transcription factor
Date released
3
August, 2017
1
October, 2019
Available data
180
fastq
153
zippedFastqFolder
94
bigWig
84
bam
34
bed narrowPeak
18
tsv
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bed3+
5
hic
4
bed broadPeak
4
bedpe bed3+
4
bigBed broadPeak
4
bigBed narrowPeak
4
hdf5
3
cool
2
csv
2
tagAlign
1
tar
Organism
4
Homo sapiens
Biosample type
32
cell line
6
tissue
4
primary cell
2
in vitro differentiated cells
Organ
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
GRCh38
102
hg19
Lab
4
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
4 results
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DNase-seq
ChIP-seq
FAIRE-seq
primary cell
skeletal muscle myoblast
2
1
endothelial cell of umbilical vein
1
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