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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
1
FAIRE-seq
Assay category
63
DNA binding
1
DNA accessibility
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
312
November, 2017
97
May, 2019
64
April, 2019
64
November, 2018
63
October, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
23
June, 2019
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
Available data
88
fastq
87
bam
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
64
Homo sapiens
Biosample type
56
cell line
8
tissue
Organ
48
liver
12
blood
12
bodily fluid
3
spleen
1
pancreas
Project
64
AMP
Genome assembly (visualization)
63
GRCh38
62
hg19
Lab
64
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
FAIRE-seq
cell line
HepG2
44
GM12878
12
tissue
liver
4
spleen
3
pancreas
1
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