Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
28
DNase-seq
1
FAIRE-seq
Assay category
37
DNA binding
29
DNA accessibility
Target of assay
32
histone
32
histone modification
17
narrow histone mark
15
broad histone mark
5
RNA binding protein
5
transcription factor
Date released
47
June, 2019
13
October, 2019
4
May, 2019
1
August, 2017
1
November, 2020
Available data
613
bigWig
609
bam
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
66
Homo sapiens
Biosample type
440
tissue
66
primary cell
8
cell line
2
in vitro differentiated cells
Organ
35
epithelium
17
vasculature
16
kidney
15
blood vessel
15
connective tissue
13
vein
9
musculature of body
6
heart
5
brain
3
eye
2
liver
Project
66
AMP
Genome assembly (visualization)
64
GRCh38
59
hg19
Lab
66
AMP-T2D consortium
Audit category:
23
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
kidney epithelial cell
4
1
+ See 20 more…
See all biosamples
Download