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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
32
DNase-seq
1
FAIRE-seq
Assay category
88
DNA binding
33
DNA accessibility
Target of assay
85
histone
85
histone modification
53
broad histone mark
32
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
30
June, 2019
25
May, 2019
October, 2017
2
November, 2018
1
July, 2019
Available data
234
bam
215
bigWig
197
bed narrowPeak
121
bigBed narrowPeak
104
tagAlign
44
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
121
Homo sapiens
Biosample type
110
tissue
11
primary cell
Organ
358
liver
121
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
121
AMP
Genome assembly (visualization)
120
GRCh38
59
hg19
Lab
121
AMP-T2D consortium
month_released!
October, 2017
BIOSAMPLE
ASSAY
121 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
layer of hippocampus
16
brain
14
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 14 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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