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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
9
DNase-seq
3
FAIRE-seq
Assay category
63
DNA binding
12
DNA accessibility
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
169
bam
165
bigWig
88
fastq
80
bed narrowPeak
75
bigBed narrowPeak
65
tsv
30
bed bedMethyl
30
bigBed bedMethyl
13
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
4
hdf5
1
csv
Organism
75
Homo sapiens
Biosample type
56
cell line
19
tissue
Organ
51
liver
12
blood
12
bodily fluid
4
spleen
3
brain
3
pancreas
1
adipose tissue
1
connective tissue
1
kidney
Project
75
AMP
Genome assembly (visualization)
73
hg19
72
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
GM12878
12
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
frontal cortex
1
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