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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
310
ChIP-seq
Assay category
310
DNA binding
Target of assay
235
transcription factor
72
histone
72
histone modification
66
recombinant protein
45
broad histone mark
34
RNA binding protein
27
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
310
November, 2017
205
June, 2019
73
November, 2018
64
April, 2019
58
May, 2019
50
December, 2017
45
October, 2018
42
August, 2017
37
October, 2019
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
389
bam
331
bigWig
321
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
68
bed broadPeak
62
bigBed broadPeak
3
tar
Organism
310
Homo sapiens
Biosample type
249
cell line
57
tissue
4
primary cell
Organ
249
liver
63
brain
4
epithelium
4
vasculature
blood vessel
Project
310
AMP
Genome assembly (visualization)
278
GRCh38
256
hg19
Lab
310
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
310 results
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Clear Filters
ChIP-seq
cell line
HepG2
249
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
choroid plexus epithelial cell
2
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