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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
267
ChIP-seq
Assay category
267
DNA binding
Target of assay
236
transcription factor
73
histone
73
histone modification
66
recombinant protein
broad histone mark
35
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
267
November, 2017
202
June, 2019
73
November, 2018
40
December, 2017
39
May, 2019
32
October, 2019
30
December, 2018
27
April, 2019
26
October, 2018
24
August, 2017
17
January, 2019
14
September, 2018
5
September, 2017
2
July, 2019
1
November, 2020
1
October, 2017
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
267
Homo sapiens
Biosample type
242
cell line
19
tissue
6
primary cell
Organ
242
liver
25
brain
4
epithelium
4
vasculature
2
blood vessel
Project
267
AMP
Genome assembly (visualization)
249
hg19
235
GRCh38
Lab
267
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
14
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
267 results
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Clear Filters
ChIP-seq
cell line
HepG2
242
tissue
layer of hippocampus
6
caudate nucleus
4
middle frontal area 46
4
substantia nigra
3
cerebellum (Hemisphere)
1
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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