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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
8
ATAC-seq
8
DNase-seq
1
FAIRE-seq
Assay category
58
DNA binding
17
DNA accessibility
Target of assay
58
histone
58
histone modification
38
broad histone mark
20
narrow histone mark
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
261
bam
212
bigWig
194
bed narrowPeak
75
bigBed narrowPeak
49
tagAlign
16
tsv
11
fastq
10
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
75
Homo sapiens
Biosample type
47
tissue
18
primary cell
8
cell line
2
in vitro differentiated cells
Organ
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
19
epithelium
13
vein
12
pancreas
3
connective tissue
1
adipose tissue
1
kidney
Project
75
AMP
Genome assembly (visualization)
75
hg19
71
GRCh38
Lab
75
AMP-T2D consortium
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
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