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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
68
DNA binding
10
DNA accessibility
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
36
May, 2019
33
October, 2019
5
June, 2019
4
November, 2017
Available data
109
bam
91
bigWig
80
bed narrowPeak
78
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
13
tsv
11
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
78
Homo sapiens
Biosample type
57
tissue
21
primary cell
Organ
358
liver
127
brain
104
kidney
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
78
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
78
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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